• "Candidatus Paraporphyromonas polyenzymogenes" encodes multi-modular cellulases linked to the type IX secretion system 

      Naas, Adrian Ertsås; Solden, Lindsey M.; Norbeck, Angela D.; Brewer, Heather M.; Hagen, Live Heldal; Heggenes, Ingrid Marie Høymyr; McHardy, Alice Carolyn; Mackie, Roderick Ian; Pasǎ-Tolić, Liljana J.; Arntzen, Magnus Øverlie; Eijsink, Vincent; Koropatkin, Nicole M.; Hess, Matthias; Wrighton, Kelly C.; Pope, Phillip (Journal article; Peer reviewed, 2018)
    • DRAM for distilling microbial metabolism to automate the curation of microbiome function 

      Shaffer, Michael; Borton, Mikayla A.; McGivern, Bridget B.; Zayed, Ahmed A.; Leanti La Rosa, Sabina; Solden, Lindsey M; Liu, Pengfei; Narrowe, Adrienne B.; Rodríguez-Ramos, Josué; Bolduc, Benjamin; Gazitúa, M. Consuelo; Daly, Rebecca A.; Smith, Garrett J.; Vik, Dean R.; Pope, Phillip Byron; Sullivan, Matthew B; Roux, Simon; Wrighton, Kelly C. (Peer reviewed; Journal article, 2020)
      Microbial and viral communities transform the chemistry of Earth's ecosystems, yet the specific reactions catalyzed by these biological engines are hard to decode due to the absence of a scalable, metabolically resolved, ...